fgbio

Tools for working with genomic and high throughput sequencing data.

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RemoveSamTags

Overview

Group: SAM/BAM

Removes SAM tags from a SAM or BAM file. If no tags to remove are given, the original file is produced.

Arguments

Name Flag Type Description Required? Max # of Values Default Value(s)
input i PathToBam Input SAM or BAM. Required 1  
output o PathToBam Output SAM or BAM. Required 1  
tags-to-remove t String The tags to remove. Optional Unlimited